Code for quiz 6 more dplyr and our first interactive chart using echarts4r.
drug_cos.csv
, health_cos.csv
into R and assign to the variables drug_cos
and health_cos
, respectively.drug_cos <- read.csv("http://estanny.com/static/week6/drug_cos.csv")
health_cos <- read_csv("http://estanny.com/static/week6/health_cos.csv")
glimpse
to get a glimpse of the datadrug_cos %>% glimpse()
Rows: 104
Columns: 9
$ ticker <chr> "ZTS", "ZTS", "ZTS", "ZTS", "ZTS", "ZTS", "Z...
$ name <chr> "Zoetis Inc", "Zoetis Inc", "Zoetis Inc", "Z...
$ location <chr> "New Jersey; U.S.A", "New Jersey; U.S.A", "N...
$ ebitdamargin <dbl> 0.149, 0.217, 0.222, 0.238, 0.182, 0.335, 0....
$ grossmargin <dbl> 0.610, 0.640, 0.634, 0.641, 0.635, 0.659, 0....
$ netmargin <dbl> 0.058, 0.101, 0.111, 0.122, 0.071, 0.168, 0....
$ ros <dbl> 0.101, 0.171, 0.176, 0.195, 0.140, 0.286, 0....
$ roe <dbl> 0.069, 0.113, 0.612, 0.465, 0.285, 0.587, 0....
$ year <int> 2011, 2012, 2013, 2014, 2015, 2016, 2017, 20...
health_cos %>% glimpse()
Rows: 464
Columns: 11
$ ticker <chr> "ZTS", "ZTS", "ZTS", "ZTS", "ZTS", "ZTS", "ZT...
$ name <chr> "Zoetis Inc", "Zoetis Inc", "Zoetis Inc", "Zo...
$ revenue <dbl> 4233000000, 4336000000, 4561000000, 478500000...
$ gp <dbl> 2581000000, 2773000000, 2892000000, 306800000...
$ rnd <dbl> 427000000, 409000000, 399000000, 396000000, 3...
$ netincome <dbl> 245000000, 436000000, 504000000, 583000000, 3...
$ assets <dbl> 5711000000, 6262000000, 6558000000, 658800000...
$ liabilities <dbl> 1975000000, 2221000000, 5596000000, 525100000...
$ marketcap <dbl> NA, NA, 16345223371, 21572007994, 23860348635...
$ year <dbl> 2011, 2012, 2013, 2014, 2015, 2016, 2017, 201...
$ industry <chr> "Drug Manufacturers - Specialty & Generic", "...
names_drug <- drug_cos %>% names()
names_health <- health_cos %>% names()
intersect(names_drug, names_health)
[1] "ticker" "name" "year"
For drug_cos
select (in this order): ticker
, year
, grossmargin
-Extract observations for 2018
-Assign output to drug_subset
-For health.cos
select (in this order): ticker
, year
, revenue
, gp
, industry
-Extract observations for 2018
-Assign output to health_subset
drug_subset
join with columns in health_subset
drug_subset %>% left_join(health_subset)
ticker year grossmargin revenue gp
1 ZTS 2018 0.672 5825000000 3914000000
2 PRGO 2018 0.387 4731700000 1831500000
3 PFE 2018 0.790 53647000000 42399000000
4 MYL 2018 0.350 11433900000 4001600000
5 MRK 2018 0.681 42294000000 28785000000
6 LLY 2018 0.738 24555700000 18125700000
7 JNJ 2018 0.668 81581000000 54490000000
8 GILD 2018 0.781 22127000000 17274000000
9 BMY 2018 0.710 22561000000 16014000000
10 BIIB 2018 0.865 13452900000 11636600000
11 AMGN 2018 0.827 23747000000 19646000000
12 AGN 2018 0.861 15787400000 13596000000
13 ABBV 2018 0.764 32753000000 25035000000
industry
1 Drug Manufacturers - Specialty & Generic
2 Drug Manufacturers - Specialty & Generic
3 Drug Manufacturers - General
4 Drug Manufacturers - Specialty & Generic
5 Drug Manufacturers - General
6 Drug Manufacturers - General
7 Drug Manufacturers - General
8 Drug Manufacturers - General
9 Drug Manufacturers - General
10 Drug Manufacturers - General
11 Drug Manufacturers - General
12 Drug Manufacturers - General
13 Drug Manufacturers - General
*Start with drug_cos
Extract observations for the ticker MYL from drug_cos
Assign output to the variable drug_cos_subset
drug_cos_subset <- drug_cos %>%
filter(ticker == "MYL")
*Display drug_cos_subset
drug_cos_subset
ticker name location ebitdamargin grossmargin netmargin
1 MYL Mylan NV United Kingdom 0.245 0.418 0.088
2 MYL Mylan NV United Kingdom 0.244 0.428 0.094
3 MYL Mylan NV United Kingdom 0.228 0.440 0.090
4 MYL Mylan NV United Kingdom 0.242 0.457 0.120
5 MYL Mylan NV United Kingdom 0.243 0.447 0.090
6 MYL Mylan NV United Kingdom 0.190 0.424 0.043
7 MYL Mylan NV United Kingdom 0.272 0.402 0.058
8 MYL Mylan NV United Kingdom 0.258 0.350 0.031
ros roe year
1 0.161 0.146 2011
2 0.163 0.184 2012
3 0.153 0.209 2013
4 0.169 0.283 2014
5 0.133 0.089 2015
6 0.052 0.044 2016
7 0.121 0.054 2017
8 0.074 0.028 2018
drug_cos_subset
with the columns of health_cos
*Assign the output to combo_df
combo_df <- drug_cos_subset %>%
left_join(health_cos)
*Display combo_df
combo_df
ticker name location ebitdamargin grossmargin netmargin
1 MYL Mylan NV United Kingdom 0.245 0.418 0.088
2 MYL Mylan NV United Kingdom 0.244 0.428 0.094
3 MYL Mylan NV United Kingdom 0.228 0.440 0.090
4 MYL Mylan NV United Kingdom 0.242 0.457 0.120
5 MYL Mylan NV United Kingdom 0.243 0.447 0.090
6 MYL Mylan NV United Kingdom 0.190 0.424 0.043
7 MYL Mylan NV United Kingdom 0.272 0.402 0.058
8 MYL Mylan NV United Kingdom 0.258 0.350 0.031
ros roe year revenue gp rnd netincome
1 0.161 0.146 2011 6129825000 2563364000 294728000 536810000
2 0.163 0.184 2012 6796100000 2908300000 401300000 640900000
3 0.153 0.209 2013 6909100000 3040300000 507800000 623700000
4 0.169 0.283 2014 7719600000 3528000000 581800000 929400000
5 0.133 0.089 2015 9429300000 4216100000 671900000 847600000
6 0.052 0.044 2016 11076900000 4697000000 826800000 480000000
7 0.121 0.054 2017 11907700000 4783100000 783300000 696000000
8 0.074 0.028 2018 11433900000 4001600000 704500000 352500000
assets liabilities marketcap
1 11598143000 8093361000 9152949366
2 11931897000 8576069000 11186639345
3 15294800000 12334900000 16615987073
4 15820500000 12544500000 21097801310
5 22267700000 12501900000 26588761155
6 34726200000 23608600000 20414265402
7 35806300000 22498700000 22696620826
8 32734900000 20567800000 14128302853
industry
1 Drug Manufacturers - Specialty & Generic
2 Drug Manufacturers - Specialty & Generic
3 Drug Manufacturers - Specialty & Generic
4 Drug Manufacturers - Specialty & Generic
5 Drug Manufacturers - Specialty & Generic
6 Drug Manufacturers - Specialty & Generic
7 Drug Manufacturers - Specialty & Generic
8 Drug Manufacturers - Specialty & Generic
ticker
, name
, location
, and industry
are the same for all the observations*Assign the company name to co_name
co_name <- combo_df %>%
distinct(name) %>%
pull()
*Assign the company location to co_location
co_location <- combo_df %>%
distinct(location) %>%
pull()
*Assign the industry to co_industry
group
co_industry <- combo_df %>%
distinct(industry) %>%
pull()
Put the r inline commands used in the blanks below. When you knit the document the results of the commands will be displayed in your text.
The company Mylan NV is located in United Kingdom and is a member of the drug manufacturers industry group.
*Start with combo_df
*Select variables (in this order): year
, grossmargin
, netmargin
, revenue
, gp
, netincome
*Assign the output to combo_df_subset
combo_df_subset <- combo_df %>%
select(year, grossmargin, netmargin,
revenue, gp, netincome)
*Display combo_df_subset
combo_df_subset
year grossmargin netmargin revenue gp netincome
1 2011 0.418 0.088 6129825000 2563364000 536810000
2 2012 0.428 0.094 6796100000 2908300000 640900000
3 2013 0.440 0.090 6909100000 3040300000 623700000
4 2014 0.457 0.120 7719600000 3528000000 929400000
5 2015 0.447 0.090 9429300000 4216100000 847600000
6 2016 0.424 0.043 11076900000 4697000000 480000000
7 2017 0.402 0.058 11907700000 4783100000 696000000
8 2018 0.350 0.031 11433900000 4001600000 352500000
*Create the variable grossmargin_check
to compare with the variable grossmargin
. They should be equal. - grossmargin_check
= gp
/ revenue
*Create the variable close_enough
to check that the absolute value of the difference between grossmargin_check
and grossmargin
is less than 0.001.
combo_df_subset %>%
mutate(grossmargin_check = gp / revenue,
close_enough = abs(grossmargin_check - grossmargin) < 0.001)
year grossmargin netmargin revenue gp netincome
1 2011 0.418 0.088 6129825000 2563364000 536810000
2 2012 0.428 0.094 6796100000 2908300000 640900000
3 2013 0.440 0.090 6909100000 3040300000 623700000
4 2014 0.457 0.120 7719600000 3528000000 929400000
5 2015 0.447 0.090 9429300000 4216100000 847600000
6 2016 0.424 0.043 11076900000 4697000000 480000000
7 2017 0.402 0.058 11907700000 4783100000 696000000
8 2018 0.350 0.031 11433900000 4001600000 352500000
grossmargin_check close_enough
1 0.4181790 TRUE
2 0.4279366 TRUE
3 0.4400428 TRUE
4 0.4570185 TRUE
5 0.4471276 TRUE
6 0.4240356 TRUE
7 0.4016813 TRUE
8 0.3499768 TRUE
*Create the variable netmargin_check
to compare with the variable netmargin
. They should be equal.
*Create the variable close_enough
to check that the absolute value of the difference between netmargin_check
and netmargin
is less than 0.001
combo_df_subset %>%
mutate(netmargin_check = netincome / revenue,
close_enough = abs(netmargin_check - netmargin) < 0.001)
year grossmargin netmargin revenue gp netincome
1 2011 0.418 0.088 6129825000 2563364000 536810000
2 2012 0.428 0.094 6796100000 2908300000 640900000
3 2013 0.440 0.090 6909100000 3040300000 623700000
4 2014 0.457 0.120 7719600000 3528000000 929400000
5 2015 0.447 0.090 9429300000 4216100000 847600000
6 2016 0.424 0.043 11076900000 4697000000 480000000
7 2017 0.402 0.058 11907700000 4783100000 696000000
8 2018 0.350 0.031 11433900000 4001600000 352500000
netmargin_check close_enough
1 0.08757346 TRUE
2 0.09430409 TRUE
3 0.09027225 TRUE
4 0.12039484 TRUE
5 0.08989002 TRUE
6 0.04333342 TRUE
7 0.05844957 TRUE
8 0.03082938 TRUE
Fill in the blanks
Put the command you use in the Rchunks in the Rmd file for this quiz
Use the health_cos data
For each industry calculate mean_grossmargin_percent = mean(gp / revenue) * 100 median_grossmargin_percent = median(gp / revenue) * 100 min_grossmargin_percent = min(gp / revenue) * 100 max_grossmargin_percent = max(gp / revenue) * 100
health_cos %>%
group_by(industry) %>%
summarize(mean_grossmargin_percent = mean(gp / revenue) * 100,
median_grossmargin_percent = median(gp / revenue) * 100,
min_grossmargin_percent = min(gp / revenue) * 100,
max_grossmargin_percent = max(gp / revenue) * 100
)
# A tibble: 9 x 5
industry mean_grossmargi~ median_grossmar~ min_grossmargin~
* <chr> <dbl> <dbl> <dbl>
1 Biotech~ 92.5 92.7 81.7
2 Diagnos~ 50.5 52.7 28.0
3 Drug Ma~ 75.4 76.4 36.8
4 Drug Ma~ 47.9 42.6 34.3
5 Healthc~ 20.5 19.6 10.0
6 Medical~ 55.9 37.4 28.1
7 Medical~ 70.8 72.0 53.2
8 Medical~ 10.4 5.38 2.49
9 Medical~ 53.9 52.8 40.5
# ... with 1 more variable: max_grossmargin_percent <dbl>
Fill in the blanks
Use the health_cos data
Extract observations for the ticker BMY from health_cos
and assign to the variable health_cos_subset
health_cos_subset <- health_cos %>%
filter(ticker == "BMY")
health_cos_subset
health_cos_subset
# A tibble: 8 x 11
ticker name revenue gp rnd netincome assets liabilities
<chr> <chr> <dbl> <dbl> <dbl> <dbl> <dbl> <dbl>
1 BMY Bris~ 2.12e10 1.56e10 3.84e9 3.71e9 3.30e10 17103000000
2 BMY Bris~ 1.76e10 1.30e10 3.90e9 1.96e9 3.59e10 22259000000
3 BMY Bris~ 1.64e10 1.18e10 3.73e9 2.56e9 3.86e10 23356000000
4 BMY Bris~ 1.59e10 1.19e10 4.53e9 2.00e9 3.37e10 18766000000
5 BMY Bris~ 1.66e10 1.27e10 5.92e9 1.56e9 3.17e10 17324000000
6 BMY Bris~ 1.94e10 1.45e10 5.01e9 4.46e9 3.37e10 17360000000
7 BMY Bris~ 2.08e10 1.47e10 6.48e9 1.01e9 3.36e10 21704000000
8 BMY Bris~ 2.26e10 1.60e10 6.34e9 4.92e9 3.50e10 20859000000
# ... with 3 more variables: marketcap <dbl>, year <dbl>,
# industry <chr>
In the console, type ?distinct
. Go to the help pane to see what distinct does
In the console, type ?pull
. Go to the help pane to see what pull does
Run the code below
health_cos_subset %>%
distinct(name) %>%
pull(name)
[1] "Bristol Myers Squibb Co"
co_name <- health_cos_subset %>%
distinct(name) %>%
pull(name)
You can take output from your code and include it in your text.
Bristol Myers Squibb Co
*In following chuck
co_industry
co_industry <- health_cos_subset %>%
distinct(industry) %>%
pull()
This is outside the Rchunck. Put the r inline commands used in the blanks below. When you knit the document the results of the commands will be displayed in your text.
The company Bristol Myers Squibb Cois a member of the Drug Manufacturers - General group.
-start with health_cos THEN -group_by industry THEN -calculate the median research and development expenditure by industry -assign the output to df
glimpse
to glimpse the data for the plots.df %>% glimpse()
Rows: 9
Columns: 2
$ industry <chr> "Biotechnology", "Diagnostics & Research", "D...
$ med_rnd_rev <dbl> 0.48317287, 0.05620271, 0.17451442, 0.0685187...
-use ggplot
to initialize the chart -data is df
-the variable industry
is mapped to the x-axis -reorder it based the value of med_rnd_rev
-the variable med_rnd_rev
is mapped to the y-axis -add a bar chart using geom_col
-use scale_y_continuous
to label the y-axis with percent -use coord_flip()
to flip the coordinates -use labs
to add title, subtitle and remove x and y-axis -use theme_ipsum()
from the hrbrthemes package to improve the themes
ggplot(data = df,
mapping = aes(
x = reorder(industry, med_rnd_rev),
y = med_rnd_rev
))+
geom_col()+
scale_y_continuous(labels = scales::percent)+
coord_flip()+
labs(
title = "Median R&D expenditures" ,
subtitle = "by industry as a percent of revenue from 2011 to 2018",
x = NULL, y = NULL) +
theme_ipsum()
ggsave(filename = "preview.png",
path = here::here("_posts", "2021-03-06-joining-data"))
-start with the data df
-use arrange
to reorder med_rnd_rev
-use e_charts
to initialize a chart -the variable industry is mapped to the x-axis -add a bar chart using e_bar
with the values of med_rnd_rev
-use e_flip_coords()
to flip the coordinates -use e_title
to add the title and the subtitle -use e_legend
to remove the legends -use e_x_axis
to change format of labels on x-axis to percent -use e_y_axis
to remove labels on y-axis- -use e_theme
to change the theme. Find more themes here
df %>%
arrange(med_rnd_rev) %>%
e_charts(
x = industry
) %>%
e_bar(
serie = med_rnd_rev,
name = "median"
) %>%
e_flip_coords() %>%
e_tooltip() %>%
e_title(
text = "Median industry R&D expenditures",
subtext = "by industry as a percent of revenue from 2011 to 2018",
left = "center") %>%
e_legend(FALSE) %>%
e_x_axis(
formatter = e_axis_formatter("percent", digits = 0)
) %>%
e_y_axis(
show = FALSE
) %>%
e_theme("infographic")